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Blackshaw Lab

Building and Rebuilding the Retina and Hypothalamus

  • Home
  • Research
  • Publications
  • Members
  • Datasets & Techniques
  • Home
  • Research
  • Publications
  • Members
  • Datasets & Techniques

Category: <span>lncRNAs</span>

The long noncoding RNA NEAT1 modulates neuronal excitability

lncRNAs, Protein microarray, Proteomics

Barry G, Briggs JA, Hwang DW, Nayler SP, Fortuna PRJ, Jonkhout N, Dachet F, Maag JLV, Mestdagh P, Singh EM, Avesson L, Kaczorowski DC, Ozturk E, Jones NC, Vetter I, Arriola-Martinez L, Hu J, Franco GR, Warn VM, Gong A, Dinger ME, Rigo F, Lipovich L, Morris MJ, O’Brien TJ, Lee DS, Loeb JA, Blackshaw S, Mattick JA, and Wolvetang EJ. Sci Reports 2017 7:40127.

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Long noncoding RNA-dependent transcriptional regulation in neuronal development and disease

Development, lncRNAs, Review article

Clark BS and Blackshaw S. Frontiers in Genetics, 2014 5:164.

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The long non-coding RNA Gomafu is involved in neuronal activation and schizophrenia-associated alternative splicing

lncRNAs, Protein microarray

Barry G, Briggs J, Poth EM, Vanichkina , Ratnu VS, Nayler SP, Nones K, Bredy TW, Nakagawa S, Blackshaw S, Wolvetang EJ, Mattick JS. Mol Psych 2013 19:486-94.

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The long noncoding RNA RNCR2 directs mouse retinal cell specification

Cell fate, Development, lncRNAs, Retina

Rapicavoli N, Poth E, Blackshaw S. BMC Dev Biol 2010 10:49

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New meaning in the message: noncoding RNAs and their role in retinal development

Development, lncRNAs, Review article

Rapicavoli NA, Blackshaw S. Dev Dynam, 2009 238:2103-14.

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Genomic analysis of mouse retinal development

Cell fate, Development, lncRNAs, Neurogenesis, Retina, SAGE, Transcriptomics

Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber G, Lee K, Fraioli RE, Cho S-H, Yung R, Asch E, Wong WH, Cepko CL. PLoS Biol 2004; 2:E247.

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Research Areas

  • AAV
  • Antibody specificity
  • ATAC-Seq
  • Autoimmune disease
  • Behavior
  • Book Chapter
  • Cell fate
  • Cell lineage analysis
  • Chemical senses
  • Chemogenetics
  • ChIP-Seq
  • Circadian
  • Commentary
  • D-Amino acids
  • Development
  • Diabetes
  • Extraretinal photoreceptors
  • FGF
  • Human genetics
  • Hypothalamus
  • In vivo electroporation
  • Lens
  • Lhx2
  • lncRNAs
  • Metabolism
  • Muller glia
  • Neural circuitry
  • Neural development
  • Neurodegeneration
  • Neurogenesis
  • Neurotransmitters
  • New technique
  • Nitric oxide
  • Notch/Delta
  • Nucleogenesis
  • Photoreceptor
  • Protein microarray
  • Proteomics
  • Protocol
  • Radial glia
  • Retina
  • Review article
  • RNA binding proteins
  • RNA splicing
  • RPE
  • SAGE
  • scRNA-Seq
  • Shh
  • Signal transduction
  • Sleep
  • Spatial patterning
  • SUMOylation
  • Suprachiasmatic nucleus
  • Tanycytes
  • Thalamus
  • Transcription factor
  • Transcriptomics
  • Visual cycle
  • Wnt

Recent Posts

  • Cell-specific regulation of gene expression using splicing-dependent frameshifting
  • Ectopic insert-dependent neuronal expression of GFAP promoter-driven AAV constructs in adult mouse retina
  • LRLoop: A method to predict feedback loops in cell-cell communication
  • Notch Inhibition Promotes Regeneration and Immunosuppression Supports Cone Survival in a Zebrafish Model of Inherited Retinal Dystrophy
  • Genetic loss of function of Ptbp1 does not induce glia-to-neuron conversion in retina

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