Serial Analysis of Gene Expression
Blackshaw S, Kim JB, St. Croix B, Polyak K. Current Protocols in Human Genetics, Unit 11.6 2007.
Serial Analysis of Gene Expression
Blackshaw S, Kim JB, St. Croix B, Polyak K. Current Protocols in Molecular Biology, Unit 25B.6 2007.
“SAGE,” in Encyclopedia of Genetics, Genomics, Proteomics and Bioinformatics
Blackshaw S. (Quackenbush, J, Little P, eds), John Wiley/ Sons 2005.
Clustering Analysis of SAGE data: A Poisson Approach
Cai L, Huang H, Blackshaw S, Liu JS, Cepko CL, Wong WH. Genome Biol 2004; 5:R51.
Genomic analysis of mouse retinal development
Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber G, Lee K, Fraioli RE, Cho S-H, Yung R, Asch E, Wong WH, Cepko CL. PLoS Biol 2004; 2:E247.
MicroSAGE is highly representative and reproducible, but reveals major differences in gene expression between samples obtained from identical tissues
Blackshaw S, Kuo WP, Park PJ, Tsujikawa M, Gunnersen JM, Scott HS, Wee- Boon M, Tan SS, Cepko CL. Genome Biol 2003 4:R17.
Profile of the genes expressed in the human peripheral retina, macula, and retinal pigment epithelium determined through serial analysis of gene expression (SAGE)
Sharon D*, Blackshaw S*, Cepko CL, Dryja TP. Proc Natl Acad Sci USA 2002 99:315-20 (* indicates equal contribution by both authors).
Serial Analysis of Gene Expression
Blackshaw S, Kim, JB, St. Croix B, Polyak K. Current Protocols in Molecular Biology, Unit 25B.6 2002.
“SAGE”
Blackshaw S. for Ergito.com, Virtual Text, Cambridge, MA 2002.
Comprehensive analysis of photoreceptor gene expression and the identification of candidate retinal disease genes
Blackshaw S, Fraioli RE, Furukawa T, Cepko CL. Cell 2001 107:579-89.