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Blackshaw Lab

Building and Rebuilding the Retina and Hypothalamus

  • Home
  • Research
  • Publications
  • Members
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  • Home
  • Research
  • Publications
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TFII-I, a transcription factor deleted in Williams Syndrome, localizes to areas in mouse brain affected in humans

Human genetics, Transcription factor

Danoff SK, Taylor H, Blackshaw S, Desiderio SV. Neuroscience 2004123:931-8.

Link to Article>>

Expression of nitric oxide synthase isoforms in hippocampal neurons: species and developmental variability and implications for synaptic plasticity

Human genetics, Neurotransmitters, Nitric oxide

Blackshaw S, Sawa A, Eliasson M, Krug D, Watkins C, Gupta A, Ferante RJ, Snyder SH. Neuroscience 2003 119:979-90.

Link to Article>>

MicroSAGE is highly representative and reproducible, but reveals major differences in gene expression between samples obtained from identical tissues

SAGE, Transcriptomics

Blackshaw S, Kuo WP, Park PJ, Tsujikawa M, Gunnersen JM, Scott HS, Wee- Boon M, Tan SS, Cepko CL. Genome Biol 2003 4:R17.

Link to Article>>

FK506 binding protein 12 is expressed in rat penile innervation and upregulated after cavernous nerve injury

Signal transduction

Sezen SF, Blackshaw S, Steiner JP, Burnett AL. Int J Impot Res 2002 14:506-12.

Link to Article>> View PDF>>

The inherited blindness associated protein, AIPL1, interacts with the cell-cycle regulator protein, NUB1

Neurodegeneration, Photoreceptor, Retina

Akey DT, Zhu X, Dyer M, Li A, Sorensen A, Blackshaw S, Fukuda-Kamitani T, Daiger SP, Craft C, Kamitani T, Sohocki MM. Hum Mol Genet 2002 11:2723-33.

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Profile of the genes expressed in the human peripheral retina, macula, and retinal pigment epithelium determined through serial analysis of gene expression (SAGE)

Human genetics, Photoreceptor, Retina, SAGE, Transcriptomics

Sharon D*, Blackshaw S*, Cepko CL, Dryja TP. Proc Natl Acad Sci USA 2002 99:315-20 (* indicates equal contribution by both authors).

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Mutations in the inosine monophosphate dehydrogenase 1 gene (IMPDH1) cause the RP10 form of autosomal dominant retinitis pigmentosa

Human genetics, Neurodegeneration, Photoreceptor

Browne SJ, Sullivan LS, Blanton SH, Cepko CL, Blackshaw S, Birch DG, Hughbanks-Wheaton D, Heckenlively JR, Daiger SP. Hum Mol Genet 2002 11:559-568.

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Serial Analysis of Gene Expression

Book Chapter, Protocol, SAGE

Blackshaw S, Kim, JB, St. Croix B, Polyak K. Current Protocols in Molecular Biology, Unit 25B.6 2002.

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Stem cells that know their place

Commentary

Blackshaw S, Cepko C L. Nature Neuroscience. 2002 5:1251-2.

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Applying genomic technologies to neural development

Development, Retina, Review article, Transcriptomics

Blackshaw S, Livesey FJ. Current Opinion in Neurobiology. 2002 6:110-14.

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Research Areas

  • AAV
  • Antibody specificity
  • ATAC-Seq
  • Autoimmune disease
  • Behavior
  • Book Chapter
  • Cell fate
  • Cell lineage analysis
  • Chemical senses
  • Chemogenetics
  • ChIP-Seq
  • Circadian
  • Commentary
  • D-Amino acids
  • Development
  • Diabetes
  • Extraretinal photoreceptors
  • FGF
  • Human genetics
  • Hypothalamus
  • In vivo electroporation
  • Lens
  • Lhx2
  • lncRNAs
  • Metabolism
  • Muller glia
  • Neural circuitry
  • Neural development
  • Neurodegeneration
  • Neurogenesis
  • Neurotransmitters
  • New technique
  • Nitric oxide
  • Notch/Delta
  • Nucleogenesis
  • Photoreceptor
  • Protein microarray
  • Proteomics
  • Protocol
  • Radial glia
  • Retina
  • Review article
  • RNA binding proteins
  • RNA splicing
  • RPE
  • SAGE
  • scRNA-Seq
  • Shh
  • Signal transduction
  • Sleep
  • Spatial patterning
  • SUMOylation
  • Suprachiasmatic nucleus
  • Tanycytes
  • Thalamus
  • Transcription factor
  • Transcriptomics
  • Visual cycle
  • Wnt

Recent Posts

  • Cell-specific regulation of gene expression using splicing-dependent frameshifting
  • Ectopic insert-dependent neuronal expression of GFAP promoter-driven AAV constructs in adult mouse retina
  • LRLoop: A method to predict feedback loops in cell-cell communication
  • Notch Inhibition Promotes Regeneration and Immunosuppression Supports Cone Survival in a Zebrafish Model of Inherited Retinal Dystrophy
  • Genetic loss of function of Ptbp1 does not induce glia-to-neuron conversion in retina

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